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Sourcecode: last-align version File versions  Download package

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Directories

directory  CA_code

Files

file  Alignment.cc [code]
file  Alignment.hh [code]
file  AlignmentPot.cc [code]
file  AlignmentPot.hh [code]
file  AlignmentWrite.cc [code]
file  Alphabet.cc [code]
file  Alphabet.hh [code]
file  Centroid.cc [code]
file  Centroid.hh [code]
file  CyclicSubsetSeed.cc [code]
file  CyclicSubsetSeed.hh [code]
file  DiagonalTable.cc [code]
file  DiagonalTable.hh [code]
file  fileMap.cc [code]
file  fileMap.hh [code]
file  GeneralizedAffineGapCosts.cc [code]
file  GeneralizedAffineGapCosts.hh [code]
file  GeneticCode.cc [code]
file  GeneticCode.hh [code]
file  io.cc [code]
file  io.hh [code]
file  LambdaCalculator.cc [code]
file  LambdaCalculator.hh [code]
file  lastal.cc [code]
file  LastalArguments.cc [code]
file  LastalArguments.hh [code]
file  lastdb.cc [code]
file  LastdbArguments.cc [code]
file  LastdbArguments.hh [code]
file  Mmap.hh [code]
file  MultiSequence.cc [code]
file  MultiSequence.hh [code]
file  MultiSequenceQual.cc [code]
file  QualityScoreCalculator.cc [code]
file  QualityScoreCalculator.hh [code]
file  ScoreMatrix.cc [code]
file  ScoreMatrix.hh [code]
file  SegmentPair.cc [code]
file  SegmentPair.hh [code]
file  SegmentPairPot.cc [code]
file  SegmentPairPot.hh [code]
file  SegmentPairPssm.cc [code]
file  stringify.hh [code]
file  SubsetSuffixArray.cc [code]
file  SubsetSuffixArray.hh [code]
file  SubsetSuffixArraySort.cc [code]
file  VectorOrMmap.hh [code]
file  version.hh [code]
file  Xdrop3FrameAligner.cc [code]
file  Xdrop3FrameAligner.hh [code]
file  XdropAligner.cc [code]
file  XdropAligner.hh [code]
file  XdropAlignerPssm.cc [code]


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